*Microbiomes At Guelph team members indicated in bold. Please note this is not an exhaustive list of publications.
2024
- Abdi, R., Cao, W., Zogheib, A., Pukazhendhi, K. M. K., Espinal‐Ruiz, M., Gammage, S., … & Joye, I. J. (2024). Surface disinfection of wheat kernels using gas phase hydroxyl‐radical processes: Effect on germination characteristics, microbial load, and functional properties. Journal of Food Science, 89(2), 1154-1166.
- Cheng, Y., Zhao, J., Liu, Y., Zhang, T., Hsiang, T., Yu, Z., & Qin, W. (2024). Response of the Endophytic Microbiome in Cotinus coggygria Roots to Verticillium Wilt Infection. Journal of Fungi, 10(11), 792.
- Dunfield, K. E., Mitter, E. K., Richardson, A. E., Gaiero, J. R., Khosla, K., Chen, X., … & Condron, L. M. (2024). Differential structure and function of phosphorus‐mineralizing microbial communities in organic and upper mineral soil horizons across a temperate rainforest chronosequence. Environmental Microbiology, 26(3), e16600.
- Thompson, M. E., Shrestha, A., Khalaf, E. M., Rinne, J., Limay-Rios, V., Reid, L. M., & Raizada, M. N. (2024). Analysis of the Cultured Microbiome of Fertilization-Stage Maize Silks (Styles) Reveals Taxonomic Relationships Across North American Maize Genotypes and Heterotic Groups. Bacteria, 3(4), 476-498.
- Thompson, M. E., & Raizada, M. N. (2024). Biologically Relevant Methods to Test How Microbes Colonize Maize Styles (Silks): Case Study of a Pantoea Strain. Bacteria, 3(4), 287-298.
- Thompson, M. E., & Raizada, M. N. (2024). The Microbiome of Fertilization-Stage Maize Silks (Style) Encodes Genes and Expresses Traits That Potentially Promote Survival in Pollen/Style Niches and Host Reproduction. Microorganisms, 12(7), 1473.
2023
- Mafa‐Attoye, T. G., Borden, K. A., Alvarez, D. O., Thevathasan, N., Isaac, M. E., & Dunfield, K. E. (2023). Roots alter soil microbial diversity and interkingdom interactions in diversified agricultural landscapes. Oikos, 2023(1).
- Obregon, D., Mafa-Attoye, T., Baskerville, M., Mitter, E., de Souza, L. F., Oelbermann, M., … & Dunfield, K. (2023). Functionality of methane cycling microbiome during methane flux hot moments from riparian buffer systems. Science of The Total Environment, 161921.
- Ruiz-Rico, M., Renwick, S., Vancuren, S. J., Robinson, A. V., Gianetto-Hill, C., Allen-Vercoe, E., & Barat, J. M. (2023). Impact of food preservatives based on immobilized phenolic compounds on an in vitro model of human gut microbiota. Food Chemistry, 403, 134363.
- Taha-Abdelaziz, K., Singh, M., Sharif, S., Sharma, S., Kulkarni, R. R., Alizadeh, M., … & Helmy, Y. A. (2023). Intervention Strategies to Control Campylobacter at Different Stages of the Food Chain. Microorganisms, 11(1), 113.
2022
- Daisley, B. A., Chernyshova, A. M., Thompson, G. J., & Allen-Vercoe, E. (2022). Deteriorating microbiomes in agriculture-the unintended effects of pesticides on microbial life. Microbiome Research Reports, 1(1), 6.
- Goodwin, P. H. (2022). The Endosphere Microbiome of Ginseng. Plants, 11(3), 415.
- Goodwin, P. H. (2022). The Rhizosphere Microbiome of Ginseng. Microorganisms, 10(6), 1152.
- Mafa‐Attoye, T. G., Borden, K. A., Alvarez, D. O., Thevathasan, N., Isaac, M. E., & Dunfield, K. E. (2022). Roots alter soil microbial diversity and interkingdom interactions in diversified agricultural landscapes. Oikos.
- McNab, E., Benedetto, D., & Hsiang, T. (2022). The creeping bentgrass microbiome: Traditional culturing and sequencing results compared with metagenomic techniques. International Turfgrass Society Research Journal.
- Pivato, B. (2022). Christopher R. Dumigan, Jade Muileboom, Jake Gregory, Anuja Shrestha, Omar A. Hewedy and Manish N. Raizada. The Plant Holobiont Volume I: Microbiota as Part of the Holobiont; Challenges for Agriculture.
- Tosi, M., Drummelsmith, J., Obregón, D., Chahal, I., Van Eerd, L. L., & Dunfield, K. E. (2022). Cover crop-driven shifts in soil microbial communities could modulate early tomato biomass via plant-soil feedbacks. Scientific Reports, 12(1), 1-13.
2021
- Das, Q., Shay, J., Gauthier, M., Yin, X., Hasted, T. L., Ross, K., … Warriner, K., … & Diarra, M. S. (2021). Effects of vaccination against coccidiosis on gut microbiota and immunity in broiler fed bacitracin and berry pomace. Frontiers in Immunology, 1874.
- Khalaf, E. M., Shrestha, A., Rinne, J., Lynch, M. D., Shearer, C. R., Limay-Rios, V., … & Raizada, M. N. (2021). Transmitting silks of maize have a complex and dynamic microbiome. Scientific Reports, 11(1), 1-17.
2020
- Shehata, H. R., Mitterboeck, T. F., & Hanner, R. (2020). Characterization of the microbiota of commercially traded finfish fillets. Food Research International, 137, 109373.
- Tosi, M., Mitter, E. K., Gaiero, J., & Dunfield, K. (2020). It takes three to tango: the importance of microbes, host plant, and soil management to elucidate manipulation strategies for the plant microbiome. Canadian Journal of Microbiology, 66(7), 413-433.
